Finally, we're at the last post in this series - one that I've been procrastinating on, as I knew it would be a total bear to write. But, now I'm done! Hooray. Next up after this - a recent announcement of fossil marine vertebrate discoveries in the East Bay (e.g. east San Francisco Bay Area) and some photos from a recent field excavation, or as I like to call it, going fishing in the Oligocene.
The phylogenetic position of Allodesmus
The relationships of
Allodesmus
have been a serious bone of contention (pun intended…sorry) in pinniped
paleontology for several decades, and is a bit of a polarizing issue within the
field. I have my own biases which no doubt will shine through below, but will
try to show both sides of the argument. Two major camps exist within pinniped
paleontology: those in favor of pinniped diphyly and otarioid monophyly
(Otariidae + Odobenidae + Desmatophocidae + enaliarctines), and those who
embrace pinniped monophyly and phocoid monophyly (Phocoidea is a
Desmatophocidae + Phocidae clade).
A handy hand drawn phylogenetic tree with illustrations of skulls. From Barnes et al. (1985). Although outdated, no subsequent illustration has ever been put together of this caliber for pinniped evolution, and I've always wanted to redo this given our substantially expanded fossil pinniped record.
Mitchell (1966) arguably represents
the first “modern” treatment of Allodesmus, and while he did not
explicitly propose any phylogenetic hypothesis for pinnipeds, he recognized that Allodesmus was quite
derived and probably not directly ancestral to living sea lions. Prior workers,
in the absence of other fossils, implicated the fragmentary remains of Allodesmus
in the ancestry of modern pinnipeds. We now know that desmatophocids were a
relatively highly derived evolutionary experiment that lasted for about 10 Ma –
and ultimately went totally extinct – and despite predating true seals (by 5
Ma), walruses (by 2-3 Ma), and fur seals and sea lions (by 10 Ma or so) –
desmatophocids evolved independently from early pinnipeds and did not give rise
to any of these modern groups. Given the sheer abundance of Allodesmus in
the mid Miocene fossil record, it is ultimately unsurprising that it was one of
the earliest discovered fossil pinnipeds; unfortunately, this also remained one
of the only well known fossil pinnipeds for quite some time, and it was not
until the 1970’s that paleontologists could make heads or tails of it.
Allodesmus was classified as
an otariid relatively early on by such researchers as Remington Kellogg,
Theodore Downs, and Victor Scheffer. Mitchell (1966) suggested some
relationship with walruses and sea lions, and erected the subfamily
Desmatophocinae to include it and
Desmatophoca (and curiously, the
walrus
Dusignathus) within the Otariidae (=Otarioidea of other workers).
It must be stated that during the 1960’s, 1970’s, and 1980’s, most pinniped
researchers were working under the implicit assumption that pinnipeds were
diphyletic – with walruses and sea lions sharing a common bear-like ancestor,
and true seals evolving separately from a mustelid ancestor (more on this
later).
The phylogenetic hypothesis of Barnes (1972).
Barnes (1972) recognized that
desmatophocids diversified prior to the appearance of otariids, and even
recognized that otariids were more
primitive than desmatophocids in many
regards, despite diversifying long before the appearance of the earliest fossil
otariids. Barnes (1972) was appropriately skeptical that otariid ancestry had
anything to do with desmatophocids, and suggested that otariids were
secondarily derived from a primitive ancestral stock, and similarly indicated
that desmatophocids could probably not be implicated in walrus origins either.
Barnes’ (1972) proposed phylogeny can be seen above. Mitchell (1975) published
a phylogenetic hypothesis which did not differ appreciably from Barnes (1972).
The phylogenetic hypothesis of Mitchell (1975).
A later study by Repenning and
Tedford (1977) showed a more or less similar phylogeny, with desmatophocids and
odobenids sharing a more recent common ancestor than otariids. Repenning and
Tedford (1977) further agreed that no modern pinnipeds could have been derived
from the desmatophocids.
The phylogenetic hypothesis of Repenning and Tedford (1977).
New research
published by Andre Wyss in 1987 indicated the possibility that pinnipeds were not only
monophyletic (spurred by early studies of molecular phylogeny), but that
walruses and true seals (together with desmatophocids) might form a
monophyletic group (the clade Phocomorpha). As a response to this, Barnes, in
his 1989 description of the enaliarctine
Pteronarctos goedertae, published
a new phylogeny for fossil and modern pinnipeds (see below). Curiously, one of
the earliest comments regarding Wyss’ hypothesis of pinniped monophyly was that
his “conclusion is contradictory to that reached by many other researchers who
have examined many of the same characters as Wyss”. Although a fair comment
here, this point has been reiterated time and again by proponents of pinniped
diphyly, in print and in person to the point where it is reminiscent of an
appeal to authority. But I digress. Barnes (1989) shows a hand-drawn cladogram
depicting otarioid relationships, and pointed out a couple of minor holes in
Wyss’ arguments, including the observation that phocids, desmatophocids, and
the enaliarctine
Pinnarctidion all share a “mortised” (e.g. vertically
thickened/expanded) zygomatic arch (or cheekbone for the uninitiated). Barnes
pointed out that some odobeninae also possess this in addition to sirenians and
desmostylians, and that the convergent nature of this feature means it should
be avoided in phylogenetics. Such arguments are commonplace in vertebrate
paleontology, and the idea that certain types of characters ought to be avoided
because they are convergent is pervasive. However, the moment any character
evidence is ignored – for any reasoning – is the moment that subjectivity is
introduced into the analysis. Conversations with Jonathan Geisler back in
January 2011 opened my eyes to this, and as a result, my own philosophy is to
include as much character evidence as possible.
The phylogenetic hypothesis of Barnes (1989).
Regardless, Barnes (1989) did not
present a computer-assisted analysis, but rather listed a series of characters
supporting otarioid monophyly, and other clades within the Otarioidea. In a
non-computer assisted analysis, a hand-drawn cladogram is assembled based on
the listing of characters supporting “premeditated” clades – no testing is
involved, and it is completely subjective. The 1980’s saw the proliferation of
computer-aided cladistic analysis (referred to hereafter as just cladistic
analysis). For the uninitiated, cladistic analysis emphasizes the grouping of
organisms based on shared features rather than differences. This sort of
analysis is conducted by producing a list of characters (e.g. characteristics
or features) with different character states (e.g. conditions). An example of a
classic (and already mentioned) character for fossil pinnipeds would be:
Character 1: zygomatic arch. 0-splintlike, zygomatic process
tapers. 1-mortised, distal zygomatic process is dorsoventrally expanded.
This character would be coded as such:
Grizzly bear (Ursus): 0
Enaliarctos (earliest fossil pinniped): 0
Northern Fur Seal (Callorhinus): 0
California Sea
Lion (Zalophus): 0
Walrus (Odobenus): 0
Desmatophoca: 1
Allodesmus: 1
Harbor Seal (Phoca): 1
All species
coded as ‘1’ would be grouped by the computer into a clade. In this case, the
supported clade would be the clade Phocoidea. It is possible to have more than
two character states; only derived character states (e.g. anything other than
zero) will unite species together. When an analysis includes hundreds of
characters like this, it is likely that some will be mutually exclusive: for
example, in the context of this discussion, some characters might support
otarioid monophyly and others might support phocoid or phocomorph monophyly.
What happens when two characters support mutually exclusive groups of species?
The short answer is that, as you might suspect, they cancel each other out. At
larger scales, if an analysis includes dozens of characters that support
mutually exclusive clades – they will also cancel each other out if they are of
roughly equal proportions. This can be solved by one of two ways: ignoring
characters that support a clade you don’t like, or searching for additional
characters that might support one hypothesis over another. Admittedly, the
first option sounds dangerously unscientfic (…because it is), but plenty of
paleontologists are guilty of this practice, unfortunately.
An excellent summary figure contrasting the "newly" proposed phylogeny under the "Phocomorpha hypothesis" of Berta and Wyss (1994) with the "classical" view of pinniped diphyly advocated by most earlier researchers. From Berta and Wyss (1994).
A response
to the phylogenetic hypothesis of Barnes (1989) was a large cladistic analysis
of morphological data by Berta and Wyss (1994) that still remains the only
comprehensive phylogenetic analysis of pinnipeds (as alluded to below, Morgan
Churchill and I presented an even larger analysis at the 2010 SVP meeting, but
it needs a lot more work and was a good “first stab”; comprehensive
phylogenetic analysis of pinnipeds remain a viable future research project).
This study used 143 characters including skeletodental, soft tissue, and even
behavioral characters. Berta and Wyss (1994) found strong support for a
monophyletic Pinnipedia, monophyly of the Phocomorpha (walruses +
desmatophocids + true seals), and monophyly of the Phocoidea (Desmatophocidae +
true seals +
Pinnarctidion). Berta and Wyss (1994) identified that the
sheer majority of purported synapomorphies for the Otarioidea also occurred in
terrestrial arctoids (indicating that they are primitively present in
“otarioids” and are thus not phylogenetically informative), and that many other
features are also present in true seals (which, of course, were not considered
by Barnes because of the
a priori assumption that pinnipeds are
diphyletic).
The phylogenetic hypothesis of Berta and Wyss (1994); black bars denote the number of synapomorphies for each node (I think).
A biting
response to this analysis was published less than a year later by Barnes and
Hirota (1995) who criticized the definition of a few features (some of which
were later acknowledged by Deméré and Berta, 2002, to be valid criticisms).
Barnes and Hirota (1995) made some comments on Berta and Wyss characters which
in my mind don’t make much logical sense. For example, they criticize the use
of a character based on the presence of an enlarged digastric insertion on the
mandible as it is “related to the musculature and functional morphology of the
dentary and not of phylogenetic significance” (Barnes and Hirota, 1995:356). So
what? I fail to see the distinction here: all morphological features are
influenced by function to some degree, and either characteristics have a known
function, or the function is unknown and we simply do not know enough to make
an informed statement about the functional significance of a certain feature.
The second puzzling statement is a criticism of the use of soft tissue features
by Berta and Wyss (1994), as “soft anatomical structures that are not reflected
by bone morphology cannot elucidate the relationships of fossil taxa”. While it
is true that such soft tissue features are not preserved in desmatophocids,
they are present in the walrus, which is sister to the desmatophocid + true seal
clade (Phocoidea) in the analysis of Berta and Wyss (1994). Here’s the problem
with this statement: when it comes to cladistic analysis, soft and hard tissue
characters hold no inherent value over one another: they are all equally
important according to the computer. To the computer, a soft tissue character
codable only for modern pinnipeds is no different from, say, mandibular
characteristics that can only be coded for fossil and modern species with
preserved mandibles: no distinction is made. Thus, the argument that a certain
character is irrelevant because it can only be coded for a small number of
species is erroneous. To further illustrate this, there are some skeletal
characteristics that could potentially be coded for fossil pinnipeds – if found
beautifully articulated – that can generally only be coded in modern specimens.
Subsequent studies have focused on smaller groups of pinnipeds, and not a
single morphological study since has really tested any of the larger clades
within pinnipeds – and that includes the phylogenetic position of Allodesmus as
a true seal relative.
So, where
does that leave us today? It’s now 20 years since Berta and Wyss (1994) was
published, establishing a new paradigm for pinniped phylogeny – and we are
still without a followup to it. It is an excellent paper, and I strongly
recommend that any student of pinniped evolution read it. However, there’s a
serious catch. Virtually all published studies of molecular data have
unilaterally supported an otariid-odobenid clade (Otaroidea – walruses and sea
lions), and also supporting pinniped monophyly. So, molecular phylogeny
suggests a bit of a compromise between the two extremes. But, molecular
analyses – like soft tissue data – are inapplicable to the question of where Allodesmus
fits in. The postcranial skeleton of Allodesmus is very similar to
odobenids and otariids – while many features of the skull are more similar to
true seals. Personally, I’ll remark upon the fact that there are far fewer
skeletal features linking walruses with Phocoidea than there are supporting the
Phocoidea (desmatophocids + true seals), and I could be convinced of otarioid
monophyly if someone were to carefully identify a suite of synapomorphies. In
this context, my own suspicion is that molecular work is probably correct – but
as of yet I cannot point to much morphological evidence in support of it – and
that Allodesmus most likely, given the volume of shared features
identified by Berta and Wyss (994), does share common ancestry with the true
seals. Much, much more work is necessary to test all of these hypotheses, and I
am not particularly beholden to any idea, other than it is abundantly clear
that pinniped diphyly is an outdated concept not supported by modern science
and lacking molecular and anatomical support. Another post on pinniped diphyly
would be instructive.
Evolution of Allodesmus
Regardless of larger phylogenetic
relationships, a few comments can be said about the evolution of this fossil
pinniped are worth making. Allodesmus is the sister genus of Desmatophoca
– and if a genuinely separate genus, Atopotarus is closer yet to Allodesmus.
Desmatophoca is fairly old – the type specimen of Desmatophoca brachycephala
is perhaps as old as 21 Ma, demonstrating that desmatophocids diverged fairly
early from enaliarctines. Desmatophocids in general are noteworthy for being
the earliest large bodied pinnipeds to evolve; both species of Desmatophoca are
large, and most species of Allodesmus are even larger. Numerous changes
occurred between the evolution of Allodesmus from Desmatophoca-like
morphology (fossils from the Astoria Formation purportedly show that Desmatophoca
oregonensis and an “Allodesmine” co-occurred, thus demonstrating that the
two do not share an ancestor-descendant relationship – but this undescribed Allodesmus/Allodesmine
has yet to be described; Barnes and Hirota, 1995). Changes in the skull and
mandible include elongation of the rostrum, enlargement of the orbits,
development of a prenarial shelf, further elaboration of the “mortised” zygomatic
arch, fusion of postcanine tooth roots, simplification of tooth crowns,
elongation of the mandible, and enlargement of the posteroventral flange for
the digastric insertion of the mandible.
Curiously, Allodesmus
appears to have gone extinct by the early Messinian or late Tortonian (~9 Ma),
based on the age of the youngest known specimens from the Montesano Formation
of Washington and the Santa Margarita Sandstone near Santa
Cruz. Post-middle Miocene specimens of Allodesmus
are also relatively rare: the post-middle Miocene record is effectively
restricted to the partial skeleton from the Montesano Fm. of Washington,
about a dozen teeth from the Santa Margarita Sandstone near Santa
Cruz, and a few teeth from the Monterey Formation of
Orange County I saw at the Cooper Center
last Fall. In contrast, the late Miocene record of larger pinnipeds is
dominated by “imagotariine” and dusignathine walruses like Imagotaria, Gomphotaria,
Dusignathus, Pontolis (and two other unnamed dusignathine genera)
and the early odobenine Aivukus. Other pinnipeds include the early
otariids Pithanotaria starri and Thalassoleon. Interestingly,
early and Middle Miocene walruses (e.g. Proneotherium, Neotherium,
Pseudotaria) that co-occur with desmatophocids are mostly relatively small
bodied, similar in size to large fur seals and female sea lions (Pelagiarctos
is a notable exception, although it wasn’t very large). However, in the
late Miocene, walruses both increase in body size (the “smaller” walruses like Imagotaria
were only the size of large California sea lions, while monsters like Pontolis
were five or six meters in length – southern elephant seal sized) but also
became more diverse.
Future Directions
Clearly, the issue of the
phylogenetic position of
Allodesmus amongst pinnipeds is not quite a
dead and beaten horse, rather one that has been assaulted numerous times but
failed to die. As things stand, we know barely more about the relationships of
this species than we did in 1990 – which is not to deride either side of the
debate. In my opinion, the answer has not yet been adequately addressed, and
more character evidence - and a much broader taxonomic sample - are needed.
Smaller studies with limited taxonomic sampling are inherently going to be less
adequate than broader approaches, and I think the next big step is going to be
putting together a comprehensive phylogeny of all modern and fossil pinnipeds
(at least, the ones complete enough to be useful, that is). This is something
Morgan Churchill and I are planning on in the somewhat distant future; our
first stab at this was presented on a poster at the 2010 SVP meeting in Pittsburg,
which showed a somewhat similar topology to that of the Berta and Wyss (1994)
paper. As we speak, some promising research is being done by Reagan Furbish, a
student of Annalisa Berta at San Diego
State University.
Reagan had a pretty neat poster about her Master’s thesis work on the
phylogenetic position of
Allodesmus, which actually won an award for
best student poster at the Marine Mammal conference here in Dunedin
last December. Needless to say I’m really looking forward to seeing what else
she digs up.
An undescribed skull and mandible of Allodesmus sp. from the Monterey Formation, on display at the San Diego Natural History Museum. Does this represent a new species of Allodesmus? Or a previously described species? The short answer is, nobody knows (yet).
In addition to these ongoing
issues, there is a whole lot more material of
Allodesmus known now. The
late Miocene
Allodesmus specimen at the Burke Museum (Montesano
Formation, Washington) is still undescribed, and there are numerous isolated
teeth in collections at UCMP and the Santa
Cruz Museum representing similarly young specimens of
Allodesmus from
the Santa Margarita Sandstone near Santa Cruz (the latter being an easy project
I’ll probably take on in search of “low hanging fruit”). Last fall I saw a
partial but nonetheless informative skull (with mandibles and an atlas) of
Allodesmus
kernensis from Sharktooth Hill at Sierra
College; this, and other new
specimens from SDNHM (including another nice, partially disarticulated skull),
certainly warrant further study. If you read Mitchell’s (1966) paper on
Allodesmus,
yeah, it’s big and thick and well illustrated, but the skull description is
actually quite brief. It’s been supplemented by the descriptions in Barnes
(1972), but more material always offers to provide new insights. Another
undescribed
Allodesmus from the Monterey Formation is on display at
SDNHM. There is undescribed Sharktooth Hill Bonebed material at LACM that needs
publishing, but I can’t say more about it. Barnes and Hirota (1995) also
mention an early Miocene “allodesmine” from the Astoria Formation of all
places.
Skulls like this (Allodesmus kernensis, Sharktooth Hill Bonebed, SDNHM) are by no means as impressive as some of the previously published specimens - but even squashed, roadkill specimens like this preserve a hell of a lot of morphology and beg - no, deserve careful study.
Allodesmus has been arguably
oversplit, and the taxon is in dire need of revision. Detailed study of new
material – whether from Sharktooth Hill or beyond – will help resolve questions
of diversity, biogeography, and phylogeny.
What else can be done? The sample
from the Sharktooth Hill Bonebed alone is sufficient enough to permit studies
of variation of any number of elements (skulls, mandibles, teeth, postcrania),
in addition to providing well-preserved specimens for functional analysis
(feeding ecology, muscle attachment mapping, further studies of locomotion) and
studies of ontogeny and sexual dimorphism, as well as isotope geochemistry
(e.g. Oxygen and Carbon isotopes for studying paleoecology). There is literally
a host of avenues for future research – just on a single genus of pinniped. The
sky’s the limit – and Morgan and I can’t do all of it! I hope this reaches
someone who can help out with the California
marine mammal fossil record – there is so much more left to do, even on the best known fossil pinniped.
References
L. G. Barnes. 1972. Miocene Desmatophocinae (Mammalia:
Carnivora) from California. University
of California Publications
in Geological Sciences 89:1-76.
L.G. Barnes. 1989. A new enaliarctine pinniped from the Astoria Formation, Oregon, and a classification of the Otariidae (Mammalia: Carnivora). Contributions in Science, Natural History Museum of Los Angeles County 403:1–26.
L. G. Barnes and K. Hirota. 1995. Miocene pinnipeds of the
otariid subfamily Allodesminae in the North Pacific Ocean:
Systematics and relationships. The Island
Arc 3:329-360.
L.G. Barnes, D. P. Domning, and C. E. Ray. 1985. Status of studies on fossil marine mammals. Marine Mammal Science 1:15–53.
A. Berta and A. R. Wyss. 1994. Pinniped phylogeny. Proceedings of the San Diego Society of Natural History 29:33–56.
T.A. Deméré and A. Berta. 2002. The Miocene pinniped Desmatophoca oregonensis Condon 1906 (Mammalia: Carnivora), from the Astoria Formation of Oregon; pp. 113–147 in R. J. Emry (ed.), Cenozoic Mammals of Land and Sea: Tributes to the Career of Clayton E. Ray. Smithsonian Contributions to Paleobiology 93.
E. D. Mitchell. 1966. The Miocene pinniped Allodesmus.
University of California
Publications in Geological Sciences 61:1-105.
A.R. Wyss. 1987. The walrus auditory region and the monophyly of pinnipeds. American Museum Novitates 2871:1–31.